diff --git a/edksetup.bat b/edksetup.bat
index 6c8c0aa97f..7aa167549b 100755
--- a/edksetup.bat
+++ b/edksetup.bat
@@ -77,9 +77,10 @@ if not defined EDK_TOOLS_PATH (
     )
   )
 )
-if exist %EDK_TOOLS_PATH%\Source set BASE_TOOLS_PATH=%EDK_TOOLS_PATH%
 
 :checkNt32Flag
+if exist %EDK_TOOLS_PATH%\Source set BASE_TOOLS_PATH=%EDK_TOOLS_PATH%
+
 @REM The Nt32 Emluation Platform requires Microsoft Libraries
 @REM and headers to interface with Windows.
 if /I "%1"=="--nt32" (